Gooey Cheesy Pretzel Bites with Sea Salt Topping

Gooey cheesy pretzel bites are soft, golden-brown, and stuffed with melty cheese, making them the ultimate snack for any occasion. With a chewy pretzel exterior, a warm, cheesy center, and a sprinkle of sea salt on top, these bite-sized treats are perfect for game days, parties, or just a cozy homemade indulgence.

Why You’ll Love This Recipe

  • Soft & Chewy – Classic pretzel texture with a golden crust.
  • Cheesy & Gooey – Melted cheese in every bite for ultimate comfort food.
  • Easy to Make – Simple ingredients and step-by-step instructions.
  • Perfect for Sharing – A great party snack or appetizer.

Ingredients

(Tip: You’ll find the full list of ingredients and measurements in the recipe card below.)

For the Pretzel Dough:

  • Warm water
  • Active dry yeast
  • Sugar
  • All-purpose flour
  • Salt
  • Butter, melted

For the Cheese Filling:

  • Cheddar cheese, cubed
  • Mozzarella or pepper jack (for variety)

For the Pretzel Bath:

  • Baking soda
  • Boiling water

For the Topping:

  • Coarse sea salt
  • Egg wash (egg + water, whisked)
  • Melted butter (for brushing, optional)

Directions

Make the Pretzel Dough:

  1. Activate Yeast – In a bowl, mix warm water, yeast, and sugar. Let sit for 5 minutes until frothy.
  2. Mix Dough – Add flour, salt, and melted butter. Knead for 5-7 minutes until smooth. Cover and let rise for 1 hour.

Shape & Fill the Pretzel Bites:

  1. Preheat Oven – Set to 400°F (200°C) and line a baking sheet with parchment paper.
  2. Cut Dough – Punch down dough and divide into small pieces. Flatten each piece and place a cube of cheese inside.
  3. Seal & Roll – Pinch edges together and roll into a ball.

Boil the Pretzels:

  1. Prepare Baking Soda Bath – Boil water and add baking soda.
  2. Dip Pretzel Bites – Drop each piece into the boiling water for 20-30 seconds, then remove and place on a baking sheet.

Bake & Serve:

  1. Brush with Egg Wash – This gives a golden brown finish.
  2. Sprinkle with Sea Salt – Add just enough for the perfect salty contrast.
  3. Bake – Bake for 12-15 minutes until golden brown.
  4. Brush with Butter (Optional) – For extra flavor and shine.

Servings and Timing

  • Servings: 24 pretzel bites
  • Prep Time: 20 minutes
  • Rise Time: 1 hour
  • Cook Time: 15 minutes
  • Total Time: 1 hour 35 minutes

Variations

  • Spicy Cheese Bites – Use pepper jack or add jalapeños inside.
  • Garlic Butter Pretzels – Brush with garlic butter instead of plain butter.
  • Sweet Pretzel Bites – Swap sea salt for cinnamon sugar and fill with cream cheese.
  • Stuffed Pizza Pretzels – Fill with mozzarella and pepperoni.

Storage/Reheating

  • Refrigerate – Store in an airtight container for up to 3 days.
  • Freeze – Freeze unbaked bites and bake when ready.
  • Reheat – Warm in the oven at 350°F for 5 minutes or microwave for 15 seconds.

FAQs

Can I use store-bought dough?

Yes! Pizza dough works well as a shortcut.

Why do I need to boil the pretzels?

The baking soda bath gives the pretzels their signature chewy texture and golden color.

Can I use different cheeses?

Absolutely! Try gouda, brie, or even blue cheese for a unique twist.

How do I keep the cheese from leaking out?

Seal the dough tightly and ensure the cheese is fully enclosed.

Can I make these ahead of time?

Yes! Assemble and freeze, then bake fresh when needed.

Can I make these without yeast?

A quick dough using self-rising flour and Greek yogurt can work in a pinch.

What dipping sauces go well with these?

Cheese sauce, honey mustard, marinara, or ranch are great choices.

Can I make these in an air fryer?

Yes! Air fry at 375°F for 8-10 minutes until golden brown.

How do I make them extra soft?

Brush with butter right after baking to keep them soft and flavorful.

Can I use whole wheat flour?

Yes, but the texture will be denser. Try a mix of whole wheat and all-purpose flour for a balance.

Conclusion

Gooey cheesy pretzel bites with sea salt topping are the ultimate snack, combining soft pretzels with melty cheese in every bite. Whether you’re making them for a party, game night, or just because, these easy homemade treats are guaranteed to be a crowd-pleaser. Try them today for the perfect cheesy, salty, and delicious snack!

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Gooey Cheesy Pretzel Bites with Sea Salt Topping

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These Gooey Cheesy Pretzel Bites are soft, golden-brown, and stuffed with melty cheese, then topped with flaky sea salt. Perfect as a snack, appetizer, or game-day treat!

  • Author: Beth
  • Prep Time: 15 minutes
  • Chill Time: 1 hour
  • Cook Time: 20 minutes
  • Total Time: 1 hour 35 minutes
  • Yield: 2430 pretzel bites 1x
  • Category: Appetizer, Snack
  • Method: Baking
  • Cuisine: American, German-Inspired

Ingredients

Scale
For the Pretzel Dough:
  • 2 ¼ teaspoons (1 packet) active dry yeast
  • 1 cup warm water (110°F/43°C)
  • 2 tablespoons granulated sugar
  • 2 ½ cups all-purpose flour
  • 1 teaspoon salt
  • 1 tablespoon unsalted butter, melted
For the Cheese Filling:
  • 6 oz block cheese (cheddar, mozzarella, or pepper jack), cut into ½-inch cubes
For the Baking Soda Bath:
  • 4 cups water
  • ¼ cup baking soda
For Topping:

 

  • 1 egg, beaten (for egg wash)
  • 1 tablespoon coarse sea salt or pretzel salt
  • 2 tablespoons unsalted butter, melted (for brushing)

Instructions

Make the Pretzel Dough:

Activate the Yeast:

 

In a bowl, stir together warm water, yeast, and sugar. Let sit for 5 minutes until foamy.

Mix & Knead Dough:

 

Add flour, salt, and melted butter to the yeast mixture. Mix until combined.

Knead for 5-7 minutes, until smooth and elastic.

Cover and let rise for 1 hour, until doubled in size.

Assemble the Pretzel Bites:

Cut & Stuff the Dough:

Preheat oven to 425°F (220°C).

Line a baking sheet with parchment paper.

Punch down dough and divide into 4 equal sections. Roll each section into a rope and cut into 1-inch pieces.

Flatten each piece, place a cheese cube inside, and pinch edges tightly to seal.

Baking Soda Bath:

Boil for Pretzel Texture:

Bring 4 cups of water to a boil. Stir in baking soda.

Drop pretzel bites in, a few at a time, for 20-30 seconds. Remove with a slotted spoon and place on baking sheet.

Bake & Serve:

Bake Until Golden:

 

Brush bites with egg wash and sprinkle with sea salt.

Bake for 12-15 minutes, or until deep golden brown.

Add Buttery Finish:

 

Brush hot pretzels with melted butter.

Serve warm with cheese dip, mustard, or ranch!

Notes

  • Want extra gooey cheese? Use string cheese for the filling!
  • Make them spicy by adding a pinch of cayenne to the dough.
  • Storage: Best enjoyed fresh but can be reheated at 350°F for 5 minutes.

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